Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 AC069224.1-201ENST00000566372 1715 ntBASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC23.56■■□□□ 1.36
SHANK2Q9UPX8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC23.55■■□□□ 1.36
SHANK2Q9UPX8 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 AC093433.1-201ENST00000458048 571 ntBASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SHANK2Q9UPX8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 RHOXF1P1-202ENST00000635473 501 ntBASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
SHANK2Q9UPX8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 DUX4L45-201ENST00000566406 1057 ntBASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 DERL2-202ENST00000570848 657 ntTSL 5 BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 MIR4313-201ENST00000580760 101 ntBASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SHANK2Q9UPX8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms