Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
FOXD3Q9UJU5 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 AC087499.5-201ENST00000452760 1342 ntBASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SERBP1P5-201ENST00000510079 1181 ntBASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
FOXD3Q9UJU5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AC024267.1-201ENST00000582320 895 ntBASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 AL589739.1-201ENST00000607720 493 ntBASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
FOXD3Q9UJU5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
FOXD3Q9UJU5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms