Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD1Q9UIS9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MBD1Q9UIS9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD1Q9UIS9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD1Q9UIS9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 AC093726.1-201ENST00000608064 963 ntBASIC16.17■□□□□ 0.18
MBD1Q9UIS9 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD1Q9UIS9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AL139010.1-201ENST00000454878 894 ntBASIC16.16■□□□□ 0.18
MBD1Q9UIS9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AC119751.2-201ENST00000504529 210 ntBASIC16.16■□□□□ 0.18
MBD1Q9UIS9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 WFDC1-204ENST00000613603 549 ntBASIC16.16■□□□□ 0.18
MBD1Q9UIS9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.16■□□□□ 0.18
MBD1Q9UIS9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms