Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 KRT18P2-201ENST00000447938 1258 ntBASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AC112482.1-201ENST00000492080 688 ntBASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 MIR4321-201ENST00000592276 80 ntBASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.29■□□□□ 0.04
NEUROD4Q9HD90 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AP001282.1-201ENST00000531301 1499 ntBASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 RARRES2P8-201ENST00000566335 367 ntBASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AP002472.1-201ENST00000577490 586 ntBASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
NEUROD4Q9HD90 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AC011477.6-201ENST00000604980 1927 ntBASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms