Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC067930.6-201ENST00000623257 4947 ntBASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 AC022532.1-201ENST00000624563 1728 ntBASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LRTM1Q9HBL6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AC073347.1-201ENST00000421633 2643 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AC068587.6-202ENST00000641839 5619 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 PRYP6-201ENST00000514804 343 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AC034105.1-201ENST00000563488 319 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 MIR4321-201ENST00000592276 80 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AL161645.1-201ENST00000622716 1255 ntBASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LRTM1Q9HBL6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 KRT18P2-201ENST00000447938 1258 ntBASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms