Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GPX1P2-201ENST00000429271 606 ntBASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 C20orf181-201ENST00000623918 480 ntBASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 PRAL-201ENST00000624952 3286 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 AC011477.6-201ENST00000604980 1927 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 FOXO1B-201ENST00000504678 1527 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SPDYE11-202ENST00000450699 704 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SPDYE9P-201ENST00000570642 692 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 MTDHP5-201ENST00000598980 586 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 AC026120.1-201ENST00000611536 926 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SPDYE10P-202ENST00000612005 668 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SPDYE8P-202ENST00000612377 668 ntBASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRC40Q9H9A6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AC142381.1-201ENST00000426099 345 ntBASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 MKNK2P1-201ENST00000437526 628 ntBASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRC40Q9H9A6 AC243562.1-201ENST00000560672 389 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms