Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AL645939.2-201ENST00000427340 991 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AC105233.2-201ENST00000523697 349 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AF228730.5-201ENST00000530288 346 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AL512356.2-201ENST00000546955 174 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AC015911.4-201ENST00000588022 1070 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 UXT-AS1-201ENST00000590504 1525 ntBASIC15.01□□□□□ -0.01
UBQLN3Q9H347 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
UBQLN3Q9H347 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15□□□□□ -0.01
UBQLN3Q9H347 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15□□□□□ -0.01
UBQLN3Q9H347 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC142381.1-201ENST00000426099 345 ntBASIC15□□□□□ -0.01
UBQLN3Q9H347 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15□□□□□ -0.01
UBQLN3Q9H347 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 SLC25A39P2-201ENST00000537614 270 ntBASIC15□□□□□ -0.01
UBQLN3Q9H347 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC025678.2-201ENST00000562061 970 ntBASIC15□□□□□ -0.01
UBQLN3Q9H347 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AP001059.3-201ENST00000619053 235 ntBASIC15□□□□□ -0.01
UBQLN3Q9H347 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15□□□□□ -0.01
UBQLN3Q9H347 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15□□□□□ -0.01
UBQLN3Q9H347 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
UBQLN3Q9H347 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC073439.1-201ENST00000624121 1774 ntBASIC14.99□□□□□ -0.01
UBQLN3Q9H347 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AL596257.1-201ENST00000641463 2694 ntBASIC14.99□□□□□ -0.01
UBQLN3Q9H347 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms