Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 MIR574-201ENST00000385209 96 ntBASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 RPS8P6-201ENST00000426177 609 ntBASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 C18orf15-201ENST00000623680 2534 ntBASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO3Q9BXY4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RSPO3Q9BXY4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 FAM220BP-201ENST00000377689 816 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 MCCD1P2-201ENST00000423228 335 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AC079140.1-201ENST00000508039 487 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AC084121.4-201ENST00000641598 221 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AF228730.8-201ENST00000642140 221 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AC087481.3-201ENST00000602886 1894 ntBASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RSPO3Q9BXY4 AL513477.1-201ENST00000602865 2407 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms