Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CSMD1Q96PZ7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC016694.1-201ENST00000434179 700 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 LINC01115-203ENST00000606068 577 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 CU633904.3-201ENST00000624042 1029 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC008741.2-201ENST00000612792 3115 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 REXO1L8P-201ENST00000604378 1897 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 RPL13P2-201ENST00000440687 659 ntBASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CSMD1Q96PZ7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 AC012441.1-201ENST00000446669 685 ntBASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 AC148477.9-201ENST00000623974 539 ntBASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.52□□□□□ -0.24
CSMD1Q96PZ7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 RN7SL736P-201ENST00000613111 269 ntBASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.52□□□□□ -0.25
CSMD1Q96PZ7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSMD1Q96PZ7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms