Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AC098850.1-201ENST00000419919 790 ntBASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 HIST3H2BA-201ENST00000436555 524 ntBASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 CYP4F24P-201ENST00000586049 1580 ntBASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 U82695.1-201ENST00000635752 1889 ntBASIC18.28■□□□□ 0.52
SYNGAP1Q96PV0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 TMEM261P1-201ENST00000604899 340 ntBASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC005622.1-201ENST00000636801 1703 ntBASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.27■□□□□ 0.52
SYNGAP1Q96PV0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
SYNGAP1Q96PV0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 AC004945.1-201ENST00000416738 983 ntBASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TIMM17BP1-201ENST00000545713 516 ntBASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SYNGAP1Q96PV0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms