Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SIPA1Q96FS4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIPA1Q96FS4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SIPA1Q96FS4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AC092337.1-201ENST00000568699 1129 ntBASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AC093726.1-201ENST00000608064 963 ntBASIC16.16■□□□□ 0.18
SIPA1Q96FS4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 AC046158.3-201ENST00000624947 2558 ntBASIC16.16■□□□□ 0.18
SIPA1Q96FS4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SIPA1Q96FS4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 HIST3H2BA-201ENST00000436555 524 ntBASIC16.15■□□□□ 0.18
SIPA1Q96FS4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 IGHV3-71-201ENST00000523324 359 ntBASIC16.15■□□□□ 0.18
SIPA1Q96FS4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MIR6752-201ENST00000618442 71 ntBASIC16.15■□□□□ 0.18
SIPA1Q96FS4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.15■□□□□ 0.18
SIPA1Q96FS4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.14■□□□□ 0.18
SIPA1Q96FS4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
SIPA1Q96FS4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
SIPA1Q96FS4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 AC007274.1-201ENST00000439805 662 ntBASIC16.14■□□□□ 0.17
SIPA1Q96FS4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms