Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 COX20P2-201ENST00000452636 358 ntBASIC19.22■□□□□ 0.67
DDX11Q96FC9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 AC026150.2-201ENST00000564693 1156 ntBASIC19.22■□□□□ 0.67
DDX11Q96FC9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
DDX11Q96FC9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.22■□□□□ 0.67
DDX11Q96FC9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 HYMAI-201ENST00000635591 3347 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 AC107890.1-201ENST00000422478 521 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 BASP1P1-201ENST00000430708 665 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 AC125807.1-201ENST00000483097 614 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 AJ011932.1-201ENST00000621707 465 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 AL162727.3-201ENST00000635661 2787 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 AL365203.3-201ENST00000609742 2057 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.21■□□□□ 0.67
DDX11Q96FC9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DDX11Q96FC9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
DDX11Q96FC9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
DDX11Q96FC9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 SPDYE7P-202ENST00000420373 878 ntBASIC19.2■□□□□ 0.66
DDX11Q96FC9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC138761.1-201ENST00000584393 385 ntBASIC19.2■□□□□ 0.66
DDX11Q96FC9 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC021097.1-201ENST00000607902 574 ntBASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC008267.7-201ENST00000624570 1194 ntBASIC19.2■□□□□ 0.66
DDX11Q96FC9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DDX11Q96FC9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
DDX11Q96FC9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms