Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.83■□□□□ 0.12
ATL1Q8WXF7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 AL138918.1-201ENST00000568306 659 ntBASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MIR3687-2-201ENST00000577708 61 ntBASIC15.83■□□□□ 0.12
ATL1Q8WXF7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MIR3687-1-201ENST00000614492 61 ntBASIC15.83■□□□□ 0.12
ATL1Q8WXF7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATL1Q8WXF7 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 AP000347.1-202ENST00000435868 847 ntBASIC15.82■□□□□ 0.12
ATL1Q8WXF7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.82■□□□□ 0.12
ATL1Q8WXF7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 AC243562.1-201ENST00000560672 389 ntBASIC15.82■□□□□ 0.12
ATL1Q8WXF7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 ELL2P1-201ENST00000413990 1906 ntBASIC15.82■□□□□ 0.12
ATL1Q8WXF7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATL1Q8WXF7 AL603832.2-201ENST00000566195 2125 ntBASIC15.82■□□□□ 0.12
ATL1Q8WXF7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC079140.1-201ENST00000508039 487 ntBASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.81■□□□□ 0.12
ATL1Q8WXF7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
ATL1Q8WXF7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms