Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NME9Q86XW9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.56■■□□□ 1.04
NME9Q86XW9 SLED1-202ENST00000512051 380 ntBASIC21.56■■□□□ 1.04
NME9Q86XW9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.56■■□□□ 1.04
NME9Q86XW9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC21.56■■□□□ 1.04
NME9Q86XW9 AC124283.3-201ENST00000570869 594 ntBASIC21.56■■□□□ 1.04
NME9Q86XW9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC21.56■■□□□ 1.04
NME9Q86XW9 AL033527.4-201ENST00000641026 673 ntBASIC21.56■■□□□ 1.04
NME9Q86XW9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NME9Q86XW9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.56■■□□□ 1.04
NME9Q86XW9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NME9Q86XW9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC21.56■■□□□ 1.04
NME9Q86XW9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
NME9Q86XW9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NME9Q86XW9 AL607033.1-201ENST00000623900 1599 ntBASIC21.56■■□□□ 1.04
NME9Q86XW9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NME9Q86XW9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
NME9Q86XW9 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.56■■□□□ 1.04
NME9Q86XW9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.56■■□□□ 1.04
NME9Q86XW9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.55■■□□□ 1.04
NME9Q86XW9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.55■■□□□ 1.04
NME9Q86XW9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.55■■□□□ 1.04
NME9Q86XW9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.55■■□□□ 1.04
NME9Q86XW9 AL450472.2-201ENST00000603663 1156 ntBASIC21.55■■□□□ 1.04
NME9Q86XW9 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.55■■□□□ 1.04
NME9Q86XW9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 MIR6799-201ENST00000620297 69 ntBASIC21.55■■□□□ 1.04
NME9Q86XW9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 AD000864.1-201ENST00000624076 2295 ntBASIC21.55■■□□□ 1.04
NME9Q86XW9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.55■■□□□ 1.04
NME9Q86XW9 AC079328.2-201ENST00000561241 3354 ntBASIC21.55■■□□□ 1.04
NME9Q86XW9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NME9Q86XW9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.55■■□□□ 1.04
NME9Q86XW9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.55■■□□□ 1.04
NME9Q86XW9 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
NME9Q86XW9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
NME9Q86XW9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
NME9Q86XW9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.54■■□□□ 1.04
NME9Q86XW9 BNIP3P42-201ENST00000454982 569 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 SLC25A47P1-201ENST00000531577 414 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NME9Q86XW9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.54■■□□□ 1.04
NME9Q86XW9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.54■■□□□ 1.04
NME9Q86XW9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.54■■□□□ 1.04
NME9Q86XW9 BNIP3P29-201ENST00000598302 571 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 AC233724.13-201ENST00000598383 410 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 AC133539.2-201ENST00000604757 467 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 AC011447.5-201ENST00000616168 564 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.54■■□□□ 1.04
NME9Q86XW9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 AC006449.6-201ENST00000612330 2296 ntBASIC21.54■■□□□ 1.04
NME9Q86XW9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NME9Q86XW9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NME9Q86XW9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC21.53■■□□□ 1.04
NME9Q86XW9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NME9Q86XW9 AL162726.2-201ENST00000438986 1017 ntBASIC21.53■■□□□ 1.04
NME9Q86XW9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms