Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RNFT1Q5M7Z0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 Z97205.2-201ENST00000564697 1639 ntBASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 ARSEP1-201ENST00000420443 635 ntBASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 EEF1DP4-201ENST00000446006 880 ntBASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 KRT8P37-201ENST00000451609 1420 ntBASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RNFT1Q5M7Z0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC245100.5-201ENST00000452108 331 ntBASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC243562.2-201ENST00000561247 970 ntBASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RNFT1Q5M7Z0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RNFT1Q5M7Z0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms