Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR3180-1-201ENST00000580374 94 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 MIR3180-3-201ENST00000584616 94 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AC016027.1-202ENST00000607927 1699 ntBASIC14.54□□□□□ -0.08
CCDC58Q4VC31 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CCDC58Q4VC31 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 TMPOP1-202ENST00000424642 1267 ntBASIC14.53□□□□□ -0.08
CCDC58Q4VC31 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 NKAPP1-205ENST00000585790 367 ntBASIC14.53□□□□□ -0.08
CCDC58Q4VC31 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CCDC58Q4VC31 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 PI4KAP1-204ENST00000612579 1703 ntBASIC14.52□□□□□ -0.08
CCDC58Q4VC31 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
CCDC58Q4VC31 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 PCED1CP-201ENST00000419887 785 ntBASIC14.52□□□□□ -0.09
CCDC58Q4VC31 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.52□□□□□ -0.09
CCDC58Q4VC31 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms