Protein–RNA interactions for Protein: Q3LHN1

KRTAP21-3, Keratin-associated protein 21-3, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP21-3Q3LHN1 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 PTGER4P2-201ENST00000328411 252 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 VDAC1P1-201ENST00000439229 848 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 DPY19L2P5-201ENST00000456300 331 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 PTGER4P3-201ENST00000458150 252 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 MRPL22P1-201ENST00000505398 616 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 RN7SL602P-201ENST00000578326 324 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 RN7SL718P-201ENST00000581254 303 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AP000322.3-201ENST00000608665 388 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AP006248.1-201ENST00000610471 67 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 MIR6893-201ENST00000613458 69 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 EP400NL-214ENST00000641289 2402 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TUBB8P12-201ENST00000308911 1335 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TUBB7P-202ENST00000428444 1305 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 KRT18P9-201ENST00000604826 1300 ntBASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP21-3Q3LHN1 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 LRRC59-203ENST00000576448 1531 ntBASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 MED15P3-201ENST00000413613 326 ntBASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AC136604.1-201ENST00000418535 575 ntBASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 DNM1P48-201ENST00000419538 439 ntBASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AC021305.1-201ENST00000520656 1514 ntBASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP21-3Q3LHN1 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP21-3Q3LHN1 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP21-3Q3LHN1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms