Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.73■□□□□ 0.43
KCNA1Q09470 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA1Q09470 AC003101.2-201ENST00000612557 442 ntBASIC17.73■□□□□ 0.43
KCNA1Q09470 MIR6080-201ENST00000617359 66 ntBASIC17.73■□□□□ 0.43
KCNA1Q09470 Z92544.3-201ENST00000624747 417 ntBASIC17.73■□□□□ 0.43
KCNA1Q09470 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA1Q09470 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNA1Q09470 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNA1Q09470 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA1Q09470 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA1Q09470 KRT18P28-201ENST00000453838 1332 ntBASIC17.72■□□□□ 0.43
KCNA1Q09470 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KCNA1Q09470 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 AC018892.3-201ENST00000623986 2499 ntBASIC17.72■□□□□ 0.43
KCNA1Q09470 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 BNIP3P1-202ENST00000550043 1585 ntBASIC17.72■□□□□ 0.43
KCNA1Q09470 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 AC069262.1-201ENST00000539058 672 ntBASIC17.72■□□□□ 0.43
KCNA1Q09470 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.72■□□□□ 0.43
KCNA1Q09470 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.72■□□□□ 0.43
KCNA1Q09470 AC105021.1-202ENST00000570572 669 ntBASIC17.72■□□□□ 0.43
KCNA1Q09470 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.72■□□□□ 0.43
KCNA1Q09470 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.72■□□□□ 0.43
KCNA1Q09470 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.72■□□□□ 0.43
KCNA1Q09470 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA1Q09470 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KCNA1Q09470 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA1Q09470 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KCNA1Q09470 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA1Q09470 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA1Q09470 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA1Q09470 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA1Q09470 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KCNA1Q09470 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.71■□□□□ 0.43
KCNA1Q09470 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 METTL21AP1-201ENST00000438852 635 ntBASIC17.71■□□□□ 0.43
KCNA1Q09470 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.71■□□□□ 0.43
KCNA1Q09470 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA1Q09470 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA1Q09470 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.71■□□□□ 0.43
KCNA1Q09470 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA1Q09470 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.71■□□□□ 0.43
KCNA1Q09470 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.71■□□□□ 0.43
KCNA1Q09470 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KCNA1Q09470 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA1Q09470 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms