Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
WNT3AP56704 AC254562.1-201ENST00000417586 456 ntBASIC16.32■□□□□ 0.2
WNT3AP56704 GPS2P2-201ENST00000430745 888 ntBASIC16.32■□□□□ 0.2
WNT3AP56704 AP006288.1-201ENST00000446065 395 ntBASIC16.32■□□□□ 0.2
WNT3AP56704 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 AC004967.1-201ENST00000453589 447 ntBASIC16.32■□□□□ 0.2
WNT3AP56704 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.32■□□□□ 0.2
WNT3AP56704 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 AC132872.4-202ENST00000622924 2756 ntBASIC16.32■□□□□ 0.2
WNT3AP56704 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
WNT3AP56704 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
WNT3AP56704 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 AP005117.1-202ENST00000581724 1908 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 AL691432.1-201ENST00000596308 1422 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 CNN2P11-201ENST00000429351 262 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 RBPMS2P1-201ENST00000437762 623 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
WNT3AP56704 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.31■□□□□ 0.2
WNT3AP56704 AC023511.2-201ENST00000618803 211 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 AP003680.1-201ENST00000598970 3660 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 PRAL-201ENST00000624952 3286 ntBASIC16.31■□□□□ 0.2
WNT3AP56704 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
WNT3AP56704 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.31■□□□□ 0.2
WNT3AP56704 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.31■□□□□ 0.2
WNT3AP56704 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.3■□□□□ 0.2
WNT3AP56704 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT3AP56704 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
WNT3AP56704 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
WNT3AP56704 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
WNT3AP56704 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT3AP56704 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
WNT3AP56704 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT3AP56704 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 AC011477.6-201ENST00000604980 1927 ntBASIC16.3■□□□□ 0.2
WNT3AP56704 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
WNT3AP56704 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 MIR1233-2-201ENST00000408138 82 ntBASIC16.3■□□□□ 0.2
WNT3AP56704 MIR1233-1-201ENST00000408722 82 ntBASIC16.3■□□□□ 0.2
WNT3AP56704 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
WNT3AP56704 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.3■□□□□ 0.2
WNT3AP56704 AC023141.5-201ENST00000458585 616 ntBASIC16.3■□□□□ 0.2
WNT3AP56704 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.3■□□□□ 0.2
WNT3AP56704 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.3■□□□□ 0.2
WNT3AP56704 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.3■□□□□ 0.2
WNT3AP56704 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.3■□□□□ 0.2
WNT3AP56704 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms