Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H2P55055 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NR1H2P55055 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NR1H2P55055 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NR1H2P55055 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NR1H2P55055 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.42■□□□□ 0.06
NR1H2P55055 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 ZNF259P1-201ENST00000407656 1365 ntBASIC15.41■□□□□ 0.06
NR1H2P55055 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 TMBIM7P-203ENST00000641617 1718 ntBASIC15.41■□□□□ 0.06
NR1H2P55055 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 MIR940-201ENST00000401276 94 ntBASIC15.41■□□□□ 0.06
NR1H2P55055 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.41■□□□□ 0.06
NR1H2P55055 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 AC139530.3-201ENST00000620344 690 ntBASIC15.41■□□□□ 0.06
NR1H2P55055 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.41■□□□□ 0.06
NR1H2P55055 AC148477.8-201ENST00000624298 468 ntBASIC15.41■□□□□ 0.06
NR1H2P55055 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.41■□□□□ 0.06
NR1H2P55055 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NR1H2P55055 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.41■□□□□ 0.06
NR1H2P55055 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 AC136621.1-201ENST00000624017 2304 ntBASIC15.4■□□□□ 0.06
NR1H2P55055 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 LINC00895-201ENST00000629028 1637 ntBASIC15.4■□□□□ 0.06
NR1H2P55055 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 MIR574-201ENST00000385209 96 ntBASIC15.4■□□□□ 0.06
NR1H2P55055 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 KRT18P13-201ENST00000400056 1290 ntBASIC15.4■□□□□ 0.06
NR1H2P55055 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H2P55055 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H2P55055 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.4■□□□□ 0.06
NR1H2P55055 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NR1H2P55055 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NR1H2P55055 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 CICP14-201ENST00000629111 2732 ntBASIC15.4■□□□□ 0.06
NR1H2P55055 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.4■□□□□ 0.06
NR1H2P55055 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms