Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 AC024267.1-201ENST00000582320 895 ntBASIC15.1■□□□□ 0.01
PSMD4P55036 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 AC010327.4-202ENST00000591484 748 ntBASIC15.1■□□□□ 0.01
PSMD4P55036 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.1■□□□□ 0.01
PSMD4P55036 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
PSMD4P55036 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.1■□□□□ 0.01
PSMD4P55036 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PSMD4P55036 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.09■□□□□ 0.01
PSMD4P55036 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 RPSAP43-201ENST00000402237 625 ntBASIC15.09■□□□□ 0.01
PSMD4P55036 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.09■□□□□ 0.01
PSMD4P55036 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 AC079140.1-201ENST00000508039 487 ntBASIC15.09■□□□□ 0.01
PSMD4P55036 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
PSMD4P55036 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.09■□□□□ 0.01
PSMD4P55036 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 MIR4469-201ENST00000583919 79 ntBASIC15.09■□□□□ 0.01
PSMD4P55036 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PSMD4P55036 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
PSMD4P55036 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.09■□□□□ 0.01
PSMD4P55036 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
PSMD4P55036 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PSMD4P55036 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 AC022188.1-201ENST00000620960 1664 ntBASIC15.09■□□□□ 0.01
PSMD4P55036 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PSMD4P55036 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
PSMD4P55036 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PSMD4P55036 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
PSMD4P55036 AL589702.1-201ENST00000641229 1509 ntBASIC15.08■□□□□ 0.01
PSMD4P55036 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PSMD4P55036 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PSMD4P55036 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
PSMD4P55036 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.08■□□□□ 0
PSMD4P55036 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PSMD4P55036 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PSMD4P55036 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PSMD4P55036 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PSMD4P55036 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.08■□□□□ 0
PSMD4P55036 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 KRT18P13-201ENST00000400056 1290 ntBASIC15.08■□□□□ 0
PSMD4P55036 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
PSMD4P55036 AC211486.1-202ENST00000416371 468 ntBASIC15.08■□□□□ 0
PSMD4P55036 AC245100.5-201ENST00000452108 331 ntBASIC15.08■□□□□ 0
PSMD4P55036 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.08■□□□□ 0
PSMD4P55036 AC211476.1-201ENST00000503899 468 ntBASIC15.08■□□□□ 0
PSMD4P55036 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
PSMD4P55036 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.08■□□□□ 0
PSMD4P55036 AP000344.2-201ENST00000512987 629 ntBASIC15.08■□□□□ 0
PSMD4P55036 AC243562.1-201ENST00000560672 389 ntBASIC15.08■□□□□ 0
PSMD4P55036 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.08■□□□□ 0
PSMD4P55036 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.08■□□□□ 0
PSMD4P55036 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.08■□□□□ 0
PSMD4P55036 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.08■□□□□ 0
PSMD4P55036 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 SPTSSB-204ENST00000617024 1292 ntBASIC15.08■□□□□ 0
PSMD4P55036 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.08■□□□□ 0
PSMD4P55036 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PSMD4P55036 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PSMD4P55036 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms