Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.26□□□□□ -0.13
CX3CR1P49238 RPL13AP23-201ENST00000480739 586 ntBASIC14.26□□□□□ -0.13
CX3CR1P49238 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.26□□□□□ -0.13
CX3CR1P49238 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.26□□□□□ -0.13
CX3CR1P49238 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.26□□□□□ -0.13
CX3CR1P49238 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.26□□□□□ -0.13
CX3CR1P49238 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CX3CR1P49238 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC112504.1-201ENST00000623415 1841 ntBASIC14.26□□□□□ -0.13
CX3CR1P49238 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.26□□□□□ -0.13
CX3CR1P49238 AC126177.1-201ENST00000547829 2218 ntBASIC14.26□□□□□ -0.13
CX3CR1P49238 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CX3CR1P49238 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CX3CR1P49238 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 IL9RP2-201ENST00000423948 1312 ntBASIC14.25□□□□□ -0.13
CX3CR1P49238 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CX3CR1P49238 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.25□□□□□ -0.13
CX3CR1P49238 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.25□□□□□ -0.13
CX3CR1P49238 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.25□□□□□ -0.13
CX3CR1P49238 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.25□□□□□ -0.13
CX3CR1P49238 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CX3CR1P49238 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.25□□□□□ -0.13
CX3CR1P49238 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CX3CR1P49238 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.24□□□□□ -0.13
CX3CR1P49238 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms