Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MMP13P45452 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.83■□□□□ 0.29
MMP13P45452 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.83■□□□□ 0.29
MMP13P45452 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP13P45452 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.83■□□□□ 0.29
MMP13P45452 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP13P45452 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP13P45452 BX842568.4-201ENST00000421222 227 ntBASIC16.83■□□□□ 0.28
MMP13P45452 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.83■□□□□ 0.28
MMP13P45452 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.83■□□□□ 0.28
MMP13P45452 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MMP13P45452 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.83■□□□□ 0.28
MMP13P45452 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.83■□□□□ 0.28
MMP13P45452 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP13P45452 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
MMP13P45452 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MMP13P45452 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.83■□□□□ 0.28
MMP13P45452 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.83■□□□□ 0.28
MMP13P45452 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
MMP13P45452 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP13P45452 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.83■□□□□ 0.28
MMP13P45452 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP13P45452 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.82■□□□□ 0.28
MMP13P45452 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 MKNK2P1-201ENST00000437526 628 ntBASIC16.82■□□□□ 0.28
MMP13P45452 ALG1L5P-201ENST00000482043 771 ntBASIC16.82■□□□□ 0.28
MMP13P45452 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP13P45452 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP13P45452 RARRES2P8-201ENST00000566335 367 ntBASIC16.82■□□□□ 0.28
MMP13P45452 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.82■□□□□ 0.28
MMP13P45452 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MMP13P45452 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.82■□□□□ 0.28
MMP13P45452 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
MMP13P45452 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MMP13P45452 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.82■□□□□ 0.28
MMP13P45452 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MMP13P45452 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 AL355306.1-201ENST00000415580 579 ntBASIC16.81■□□□□ 0.28
MMP13P45452 HTR5BP-201ENST00000430851 1154 ntBASIC16.81■□□□□ 0.28
MMP13P45452 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.81■□□□□ 0.28
MMP13P45452 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.81■□□□□ 0.28
MMP13P45452 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
MMP13P45452 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MMP13P45452 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.81■□□□□ 0.28
MMP13P45452 REXO1L8P-201ENST00000604378 1897 ntBASIC16.81■□□□□ 0.28
MMP13P45452 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MMP13P45452 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms