Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
MDH1P40925 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MDH1P40925 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.27■□□□□ 0.2
MDH1P40925 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.27■□□□□ 0.2
MDH1P40925 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.27■□□□□ 0.2
MDH1P40925 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.27■□□□□ 0.2
MDH1P40925 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MDH1P40925 KRT18P22-201ENST00000402024 1347 ntBASIC16.27■□□□□ 0.2
MDH1P40925 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.27■□□□□ 0.2
MDH1P40925 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.27■□□□□ 0.2
MDH1P40925 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.27■□□□□ 0.2
MDH1P40925 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.27■□□□□ 0.2
MDH1P40925 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.27■□□□□ 0.2
MDH1P40925 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.27■□□□□ 0.2
MDH1P40925 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.27■□□□□ 0.2
MDH1P40925 HYMAI.1-201ENST00000620949 238 ntBASIC16.27■□□□□ 0.2
MDH1P40925 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MDH1P40925 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.27■□□□□ 0.2
MDH1P40925 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.27■□□□□ 0.19
MDH1P40925 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 TP73-AS1-210ENST00000637775 1455 ntBASIC16.27■□□□□ 0.19
MDH1P40925 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.27■□□□□ 0.19
MDH1P40925 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
MDH1P40925 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.27■□□□□ 0.19
MDH1P40925 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.27■□□□□ 0.19
MDH1P40925 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 AC140479.7-201ENST00000636301 2332 ntBASIC16.27■□□□□ 0.19
MDH1P40925 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
MDH1P40925 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 AC009090.5-201ENST00000624886 2285 ntBASIC16.26■□□□□ 0.19
MDH1P40925 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 AC015656.1-201ENST00000624209 3578 ntBASIC16.26■□□□□ 0.19
MDH1P40925 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MDH1P40925 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 AC006504.5-208ENST00000588784 2401 ntBASIC16.26■□□□□ 0.19
MDH1P40925 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.26■□□□□ 0.19
MDH1P40925 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MDH1P40925 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.26■□□□□ 0.19
MDH1P40925 PAWRP1-201ENST00000451083 565 ntBASIC16.26■□□□□ 0.19
MDH1P40925 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.26■□□□□ 0.19
MDH1P40925 AC090616.6-201ENST00000582640 721 ntBASIC16.26■□□□□ 0.19
MDH1P40925 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.26■□□□□ 0.19
MDH1P40925 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 IGHV3-41-201ENST00000613121 348 ntBASIC16.26■□□□□ 0.19
MDH1P40925 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 FLJ16779-201ENST00000612722 7638 ntBASIC16.26■□□□□ 0.19
MDH1P40925 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
MDH1P40925 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MDH1P40925 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MDH1P40925 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MDH1P40925 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms