Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FAM8A3P-201ENST00000427218 844 ntBASIC17.07■□□□□ 0.32
PTPN1P18031 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN1P18031 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN1P18031 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 AC092364.2-202ENST00000597012 1073 ntBASIC17.07■□□□□ 0.32
PTPN1P18031 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PTPN1P18031 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN1P18031 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN1P18031 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 BNIP3P1-202ENST00000550043 1585 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.06■□□□□ 0.32
PTPN1P18031 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTPN1P18031 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.06■□□□□ 0.32
PTPN1P18031 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.06■□□□□ 0.32
PTPN1P18031 MRPS18AP1-201ENST00000414458 589 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 SERBP1P3-201ENST00000459980 809 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 AL512361.1-201ENST00000554200 418 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 AL033527.5-202ENST00000641632 1098 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PTPN1P18031 AC022144.1-201ENST00000602255 1580 ntBASIC17.06■□□□□ 0.32
PTPN1P18031 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.06■□□□□ 0.32
PTPN1P18031 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTPN1P18031 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 AP001282.1-201ENST00000531301 1499 ntBASIC17.05■□□□□ 0.32
PTPN1P18031 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 CROCCP1-201ENST00000426910 5675 ntBASIC17.05■□□□□ 0.32
PTPN1P18031 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 TSPY16P-201ENST00000449843 468 ntBASIC17.05■□□□□ 0.32
PTPN1P18031 AC009477.1-201ENST00000452936 217 ntBASIC17.05■□□□□ 0.32
PTPN1P18031 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 AC009407.1-201ENST00000568958 598 ntBASIC17.05■□□□□ 0.32
PTPN1P18031 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.05■□□□□ 0.32
PTPN1P18031 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PTPN1P18031 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
PTPN1P18031 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN1P18031 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms