Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP2P08253 CNN2P3-201ENST00000450201 906 ntBASIC16.2■□□□□ 0.18
MMP2P08253 AC092183.1-201ENST00000469884 875 ntBASIC16.2■□□□□ 0.18
MMP2P08253 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.2■□□□□ 0.18
MMP2P08253 AL136317.3-201ENST00000618497 906 ntBASIC16.2■□□□□ 0.18
MMP2P08253 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.2■□□□□ 0.18
MMP2P08253 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.2■□□□□ 0.18
MMP2P08253 AC132872.4-202ENST00000622924 2756 ntBASIC16.2■□□□□ 0.18
MMP2P08253 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
MMP2P08253 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
MMP2P08253 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
MMP2P08253 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP2P08253 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.19■□□□□ 0.18
MMP2P08253 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
MMP2P08253 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MMP2P08253 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP2P08253 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP2P08253 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.19■□□□□ 0.18
MMP2P08253 AL079307.3-201ENST00000556114 283 ntBASIC16.19■□□□□ 0.18
MMP2P08253 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP2P08253 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP2P08253 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.19■□□□□ 0.18
MMP2P08253 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
MMP2P08253 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.19■□□□□ 0.18
MMP2P08253 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MMP2P08253 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.19■□□□□ 0.18
MMP2P08253 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 AZGP1P1-201ENST00000411909 902 ntBASIC16.18■□□□□ 0.18
MMP2P08253 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP2P08253 AL080243.2-201ENST00000418783 582 ntBASIC16.18■□□□□ 0.18
MMP2P08253 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP2P08253 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP2P08253 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP2P08253 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.18■□□□□ 0.18
MMP2P08253 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MMP2P08253 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP2P08253 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms