Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC044860.1-202ENST00000559481 777 ntBASIC19.34■□□□□ 0.69
CHGBP05060 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.34■□□□□ 0.69
CHGBP05060 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.34■□□□□ 0.69
CHGBP05060 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.34■□□□□ 0.69
CHGBP05060 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHGBP05060 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHGBP05060 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHGBP05060 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHGBP05060 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHGBP05060 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CHGBP05060 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CHGBP05060 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHGBP05060 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHGBP05060 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.33■□□□□ 0.68
CHGBP05060 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 AC245100.5-201ENST00000452108 331 ntBASIC19.33■□□□□ 0.68
CHGBP05060 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.33■□□□□ 0.68
CHGBP05060 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.33■□□□□ 0.68
CHGBP05060 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
CHGBP05060 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CHGBP05060 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.33■□□□□ 0.68
CHGBP05060 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHGBP05060 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CHGBP05060 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CHGBP05060 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.32■□□□□ 0.68
CHGBP05060 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHGBP05060 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 AL513523.2-202ENST00000427283 2040 ntBASIC19.32■□□□□ 0.68
CHGBP05060 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.32■□□□□ 0.68
CHGBP05060 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHGBP05060 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.32■□□□□ 0.68
CHGBP05060 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.32■□□□□ 0.68
CHGBP05060 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CHGBP05060 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.32■□□□□ 0.68
CHGBP05060 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.32■□□□□ 0.68
CHGBP05060 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.32■□□□□ 0.68
CHGBP05060 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.32■□□□□ 0.68
CHGBP05060 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.32■□□□□ 0.68
CHGBP05060 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CHGBP05060 AL096865.1-201ENST00000606796 927 ntBASIC19.32■□□□□ 0.68
CHGBP05060 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CHGBP05060 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CHGBP05060 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHGBP05060 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CHGBP05060 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.31■□□□□ 0.68
CHGBP05060 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.31■□□□□ 0.68
CHGBP05060 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 AC074338.1-201ENST00000416825 156 ntBASIC19.31■□□□□ 0.68
CHGBP05060 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 REXO1L1P-202ENST00000608646 1974 ntBASIC19.31■□□□□ 0.68
CHGBP05060 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
CHGBP05060 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CHGBP05060 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.3■□□□□ 0.68
CHGBP05060 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHGBP05060 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.3■□□□□ 0.68
CHGBP05060 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
CHGBP05060 AC087499.5-201ENST00000452760 1342 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms