Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TNFP01375 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TNFP01375 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 AC098614.1-201ENST00000368528 745 ntBASIC15.71■□□□□ 0.11
TNFP01375 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 HAUS4P1-201ENST00000406739 1145 ntBASIC15.71■□□□□ 0.11
TNFP01375 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFP01375 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFP01375 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.71■□□□□ 0.11
TNFP01375 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFP01375 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFP01375 CHCHD2P3-201ENST00000603038 451 ntBASIC15.71■□□□□ 0.11
TNFP01375 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.71■□□□□ 0.11
TNFP01375 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 SLC7A15P-201ENST00000424028 1363 ntBASIC15.71■□□□□ 0.11
TNFP01375 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TNFP01375 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TNFP01375 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TNFP01375 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TNFP01375 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.71■□□□□ 0.1
TNFP01375 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
TNFP01375 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
TNFP01375 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.71■□□□□ 0.1
TNFP01375 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 CU639417.3-201ENST00000624240 1404 ntBASIC15.7■□□□□ 0.1
TNFP01375 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFP01375 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFP01375 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.7■□□□□ 0.1
TNFP01375 KRT17P7-201ENST00000451704 1104 ntBASIC15.7■□□□□ 0.1
TNFP01375 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.7■□□□□ 0.1
TNFP01375 AC023310.3-201ENST00000557027 670 ntBASIC15.7■□□□□ 0.1
TNFP01375 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 AC100756.1-201ENST00000562736 682 ntBASIC15.7■□□□□ 0.1
TNFP01375 AC138749.3-201ENST00000567691 622 ntBASIC15.7■□□□□ 0.1
TNFP01375 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 AC116165.1-201ENST00000611806 668 ntBASIC15.7■□□□□ 0.1
TNFP01375 AC004790.1-201ENST00000612686 536 ntBASIC15.7■□□□□ 0.1
TNFP01375 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TNFP01375 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.7■□□□□ 0.1
TNFP01375 AP001282.1-201ENST00000531301 1499 ntBASIC15.7■□□□□ 0.1
TNFP01375 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 BNIP3P1-202ENST00000550043 1585 ntBASIC15.7■□□□□ 0.1
TNFP01375 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TNFP01375 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
TNFP01375 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFP01375 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFP01375 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFP01375 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFP01375 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
TNFP01375 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TNFP01375 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.69■□□□□ 0.1
TNFP01375 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.69■□□□□ 0.1
TNFP01375 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms