Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.05■□□□□ 0.32
RTN3O95197 AL590560.3-201ENST00000623350 461 ntBASIC17.05■□□□□ 0.32
RTN3O95197 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.05■□□□□ 0.32
RTN3O95197 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.05■□□□□ 0.32
RTN3O95197 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RTN3O95197 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.05■□□□□ 0.32
RTN3O95197 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 AL592424.1-201ENST00000563624 1536 ntBASIC17.05■□□□□ 0.32
RTN3O95197 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.05■□□□□ 0.32
RTN3O95197 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 AGGF1P2-201ENST00000426656 2106 ntBASIC17.05■□□□□ 0.32
RTN3O95197 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.05■□□□□ 0.32
RTN3O95197 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RTN3O95197 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTN3O95197 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTN3O95197 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.04■□□□□ 0.32
RTN3O95197 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.04■□□□□ 0.32
RTN3O95197 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.04■□□□□ 0.32
RTN3O95197 AL079307.3-201ENST00000556114 283 ntBASIC17.04■□□□□ 0.32
RTN3O95197 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.04■□□□□ 0.32
RTN3O95197 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.04■□□□□ 0.32
RTN3O95197 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTN3O95197 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 ME2P1-201ENST00000426028 1970 ntBASIC17.04■□□□□ 0.32
RTN3O95197 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RTN3O95197 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTN3O95197 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.04■□□□□ 0.32
RTN3O95197 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
RTN3O95197 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.03■□□□□ 0.32
RTN3O95197 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.03■□□□□ 0.32
RTN3O95197 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.03■□□□□ 0.32
RTN3O95197 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.03■□□□□ 0.32
RTN3O95197 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.03■□□□□ 0.32
RTN3O95197 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTN3O95197 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RTN3O95197 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
RTN3O95197 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
RTN3O95197 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTN3O95197 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTN3O95197 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms