Protein–RNA interactions for Protein: O75140

DEPDC5, GATOR complex protein DEPDC5, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5O75140 ACKR1-201ENST00000368121 1240 ntBASIC23.05■■□□□ 1.28
DEPDC5O75140 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
DEPDC5O75140 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.05■■□□□ 1.28
DEPDC5O75140 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
DEPDC5O75140 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC23.05■■□□□ 1.28
DEPDC5O75140 MTX1P1-201ENST00000440904 838 ntBASIC23.05■■□□□ 1.28
DEPDC5O75140 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DEPDC5O75140 AC091804.1-201ENST00000486888 567 ntBASIC23.05■■□□□ 1.28
DEPDC5O75140 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DEPDC5O75140 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC23.05■■□□□ 1.28
DEPDC5O75140 KC6-205ENST00000599934 556 ntTSL 4 BASIC23.05■■□□□ 1.28
DEPDC5O75140 AL118558.3-201ENST00000607414 1079 ntBASIC23.05■■□□□ 1.28
DEPDC5O75140 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC23.05■■□□□ 1.28
DEPDC5O75140 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC23.05■■□□□ 1.28
DEPDC5O75140 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DEPDC5O75140 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
DEPDC5O75140 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
DEPDC5O75140 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
DEPDC5O75140 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
DEPDC5O75140 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 MIR326-201ENST00000362220 95 ntBASIC23.04■■□□□ 1.28
DEPDC5O75140 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.04■■□□□ 1.28
DEPDC5O75140 FAM197Y7-201ENST00000432892 766 ntBASIC23.04■■□□□ 1.28
DEPDC5O75140 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC23.04■■□□□ 1.28
DEPDC5O75140 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.04■■□□□ 1.28
DEPDC5O75140 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
DEPDC5O75140 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
DEPDC5O75140 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 C2orf27AP3-201ENST00000434123 579 ntBASIC23.04■■□□□ 1.28
DEPDC5O75140 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC23.04■■□□□ 1.28
DEPDC5O75140 PFN2-215ENST00000497148 743 ntTSL 4 BASIC23.04■■□□□ 1.28
DEPDC5O75140 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC23.04■■□□□ 1.28
DEPDC5O75140 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC23.04■■□□□ 1.28
DEPDC5O75140 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC23.04■■□□□ 1.28
DEPDC5O75140 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC23.04■■□□□ 1.28
DEPDC5O75140 AL354718.3-201ENST00000616414 581 ntBASIC23.04■■□□□ 1.28
DEPDC5O75140 CR382287.1-201ENST00000623954 586 ntBASIC23.04■■□□□ 1.28
DEPDC5O75140 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DEPDC5O75140 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
DEPDC5O75140 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC23.03■■□□□ 1.28
DEPDC5O75140 POLL-217ENST00000628479 1953 ntTSL 5 BASIC23.03■■□□□ 1.28
DEPDC5O75140 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 AGGF1P2-201ENST00000426656 2106 ntBASIC23.03■■□□□ 1.28
DEPDC5O75140 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
DEPDC5O75140 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
DEPDC5O75140 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC23.03■■□□□ 1.28
DEPDC5O75140 B9D1-203ENST00000395615 805 ntTSL 3 BASIC23.03■■□□□ 1.28
DEPDC5O75140 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC23.03■■□□□ 1.28
DEPDC5O75140 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC23.03■■□□□ 1.28
DEPDC5O75140 ACTG1P17-201ENST00000558391 1119 ntBASIC23.03■■□□□ 1.28
DEPDC5O75140 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC23.03■■□□□ 1.28
DEPDC5O75140 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
DEPDC5O75140 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
DEPDC5O75140 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
DEPDC5O75140 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
DEPDC5O75140 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC23.02■■□□□ 1.28
DEPDC5O75140 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC23.02■■□□□ 1.28
DEPDC5O75140 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
DEPDC5O75140 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
DEPDC5O75140 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DEPDC5O75140 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
DEPDC5O75140 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC23.02■■□□□ 1.28
DEPDC5O75140 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 563.7 ms