Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCA1A8K7I4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CLCA1A8K7I4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CLCA1A8K7I4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 KRT8P49-201ENST00000604166 1432 ntBASIC15.17■□□□□ 0.02
CLCA1A8K7I4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CLCA1A8K7I4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 CEND1P1-201ENST00000451006 455 ntBASIC15.16■□□□□ 0.02
CLCA1A8K7I4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SNHG9-202ENST00000564014 471 ntBASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC091812.2-201ENST00000619081 385 ntBASIC15.16■□□□□ 0.02
CLCA1A8K7I4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLCA1A8K7I4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms