Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSX2IPQ9Y2D8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AC098614.1-201ENST00000368528 745 ntBASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 COX5BP8-201ENST00000416911 349 ntBASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AL080243.2-201ENST00000418783 582 ntBASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AC135586.1-201ENST00000539323 574 ntBASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AC140912.1-201ENST00000577171 1054 ntBASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSX2IPQ9Y2D8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
SSX2IPQ9Y2D8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SSX2IPQ9Y2D8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 AL132655.2-201ENST00000596276 594 ntBASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
SSX2IPQ9Y2D8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms