Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.14
SATB2Q9UPW6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
SATB2Q9UPW6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PCDH8P1-201ENST00000428983 2773 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AC092068.3-201ENST00000587894 2016 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AC005915.1-201ENST00000624912 2018 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AL359881.2-201ENST00000602973 570 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 AC007967.4-201ENST00000614700 386 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 LINC00554-201ENST00000564841 3011 ntBASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SATB2Q9UPW6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AC106886.4-201ENST00000623557 2502 ntBASIC15.88■□□□□ 0.13
SATB2Q9UPW6 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 KRT17P7-201ENST00000451704 1104 ntBASIC15.88■□□□□ 0.13
SATB2Q9UPW6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AP002490.2-201ENST00000524791 560 ntBASIC15.88■□□□□ 0.13
SATB2Q9UPW6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 AC011676.5-201ENST00000624864 2660 ntBASIC15.88■□□□□ 0.13
SATB2Q9UPW6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SATB2Q9UPW6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms