Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
THUMPD1Q9NXG2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC009947.1-201ENST00000444350 727 ntBASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC079781.3-201ENST00000449110 356 ntBASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 HCG4B-203ENST00000450128 991 ntBASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC079776.4-201ENST00000511039 504 ntBASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
THUMPD1Q9NXG2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 HAUS4P1-201ENST00000406739 1145 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AC092474.2-201ENST00000424288 719 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AL450487.1-201ENST00000426799 995 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AP001005.1-201ENST00000571755 1248 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 MIR7706-201ENST00000613747 67 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AL031008.1-201ENST00000619963 541 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 AC116407.3-201ENST00000623905 1129 ntBASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
THUMPD1Q9NXG2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms