Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 KRT18P64-201ENST00000434946 1219 ntBASIC14.71□□□□□ -0.05
CHD8Q9HCK8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.71□□□□□ -0.05
CHD8Q9HCK8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 AL031731.1-201ENST00000642131 2094 ntBASIC14.71□□□□□ -0.06
CHD8Q9HCK8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.71□□□□□ -0.06
CHD8Q9HCK8 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 KRT8P35-201ENST00000483942 1338 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AC138028.4-201ENST00000564984 1845 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 KRT18P25-201ENST00000508931 1278 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 MIR4649-201ENST00000582839 64 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AC242376.2-201ENST00000619355 883 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 U82695.1-201ENST00000635752 1889 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AL354989.2-201ENST00000435838 1540 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 DPM3-202ENST00000368399 517 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 AC015910.1-201ENST00000579400 975 ntBASIC14.7□□□□□ -0.06
CHD8Q9HCK8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CHD8Q9HCK8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AL121723.1-201ENST00000445194 1519 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AC104073.2-201ENST00000453737 312 ntBASIC14.69□□□□□ -0.06
CHD8Q9HCK8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CHD8Q9HCK8 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms