Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AL513523.2-202ENST00000427283 2040 ntBASIC19.02■□□□□ 0.64
RNF41Q9H4P4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 RPL37AP1-201ENST00000412502 279 ntBASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AL080243.2-201ENST00000418783 582 ntBASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AC092580.3-201ENST00000430932 139 ntBASIC19.02■□□□□ 0.64
RNF41Q9H4P4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 IGHV3-42-201ENST00000520410 361 ntBASIC19.02■□□□□ 0.64
RNF41Q9H4P4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.02■□□□□ 0.64
RNF41Q9H4P4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF41Q9H4P4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 EEF1DP4-201ENST00000446006 880 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 SERBP1P3-201ENST00000459980 809 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 TEX28P1-201ENST00000613479 1221 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 TEX28P2-201ENST00000617764 1221 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 BNIP3P1-202ENST00000550043 1585 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 AC134407.2-201ENST00000625089 1978 ntBASIC19.01■□□□□ 0.63
RNF41Q9H4P4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.01■□□□□ 0.63
RNF41Q9H4P4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 AC069224.1-201ENST00000566372 1715 ntBASIC19■□□□□ 0.63
RNF41Q9H4P4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC19■□□□□ 0.63
RNF41Q9H4P4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19■□□□□ 0.63
RNF41Q9H4P4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19■□□□□ 0.63
RNF41Q9H4P4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RNF41Q9H4P4 DUT-210ENST00000559935 569 ntTSL 3 BASIC19■□□□□ 0.63
RNF41Q9H4P4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19■□□□□ 0.63
RNF41Q9H4P4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19■□□□□ 0.63
RNF41Q9H4P4 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19■□□□□ 0.63
RNF41Q9H4P4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 AC011477.6-201ENST00000604980 1927 ntBASIC19■□□□□ 0.63
RNF41Q9H4P4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF41Q9H4P4 KRT8P37-201ENST00000451609 1420 ntBASIC19■□□□□ 0.63
RNF41Q9H4P4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF41Q9H4P4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF41Q9H4P4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms