Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 WT1-209ENST00000530998 2421 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ELK2BP-201ENST00000415014 1224 ntBASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SLC4A1APP2-201ENST00000424054 1259 ntBASIC9.72□□□□□ -0.85
LIMD2Q9BT23 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC087163.2-201ENST00000457299 853 ntBASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 CD63-210ENST00000550776 870 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 RPS29-206ENST00000557111 488 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC021087.4-201ENST00000563761 564 ntBASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC9.72□□□□□ -0.85
LIMD2Q9BT23 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 AC006538.1-201ENST00000567905 1585 ntBASIC9.71□□□□□ -0.85
LIMD2Q9BT23 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 AC006277.1-201ENST00000624348 1610 ntBASIC9.71□□□□□ -0.85
LIMD2Q9BT23 MBP-202ENST00000355994 2772 ntTSL 5 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LIMD2Q9BT23 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 MRPL20P1-201ENST00000400819 433 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PTCHD3P3-201ENST00000403073 906 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PAWRP1-201ENST00000451083 565 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 RPS15P9-201ENST00000494093 319 ntBASIC9.71□□□□□ -0.86
LIMD2Q9BT23 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC9.71□□□□□ -0.86
LIMD2Q9BT23 PP7080-204ENST00000510714 601 ntTSL 3 BASIC9.71□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms