Protein–RNA interactions for Protein: Q96KT6

LINC00208, Putative uncharacterized protein encoded by LINC00208, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00208Q96KT6 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00208Q96KT6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00208Q96KT6 MAPK10-262ENST00000641051 5738 ntBASIC9.21□□□□□ -0.93
LINC00208Q96KT6 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LINC00208Q96KT6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC00208Q96KT6 GGT3P-204ENST00000453783 1664 ntBASIC9.21□□□□□ -0.93
LINC00208Q96KT6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC9.21□□□□□ -0.93
LINC00208Q96KT6 PCDHA5-203ENST00000614258 4248 ntBASIC9.21□□□□□ -0.94
LINC00208Q96KT6 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 IGHV3-52-201ENST00000519770 353 ntBASIC9.21□□□□□ -0.94
LINC00208Q96KT6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 REXO1L8P-201ENST00000604378 1897 ntBASIC9.21□□□□□ -0.94
LINC00208Q96KT6 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 PTPRVP-205ENST00000641549 5067 ntBASIC9.21□□□□□ -0.94
LINC00208Q96KT6 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LINC00208Q96KT6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 PC-204ENST00000524491 1714 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 CICP17-201ENST00000418553 2377 ntBASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LINC00208Q96KT6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms