Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AC092474.2-201ENST00000424288 719 ntBASIC16.73■□□□□ 0.27
IFT43Q96FT9 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.73■□□□□ 0.27
IFT43Q96FT9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IFT43Q96FT9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 AC023141.5-201ENST00000458585 616 ntBASIC16.72■□□□□ 0.27
IFT43Q96FT9 KRT18P34-201ENST00000488218 1270 ntBASIC16.72■□□□□ 0.27
IFT43Q96FT9 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 AC026120.1-201ENST00000611536 926 ntBASIC16.72■□□□□ 0.27
IFT43Q96FT9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IFT43Q96FT9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.72■□□□□ 0.27
IFT43Q96FT9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 PAUPAR-201ENST00000630360 2965 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AC092364.2-201ENST00000596710 2692 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.71■□□□□ 0.27
IFT43Q96FT9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
IFT43Q96FT9 AL355306.1-201ENST00000415580 579 ntBASIC16.71■□□□□ 0.27
IFT43Q96FT9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms