Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 AC027139.1-201ENST00000565286 951 ntBASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 FGFR3P1-201ENST00000449999 601 ntBASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 AC005730.2-201ENST00000564549 1184 ntBASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 KRT8P39-201ENST00000396270 1433 ntBASIC16.54■□□□□ 0.24
PRUNE2Q8WUY3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 AC012362.1-201ENST00000434906 739 ntBASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 CNN2P10-201ENST00000443067 918 ntBASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 PRSS30P-206ENST00000641773 873 ntBASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.53■□□□□ 0.24
PRUNE2Q8WUY3 AC004899.1-201ENST00000424687 1714 ntBASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 IGLV3-15-201ENST00000518356 244 ntBASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 AC006453.4-201ENST00000636949 1252 ntBASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRUNE2Q8WUY3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 AC026410.3-201ENST00000514280 936 ntBASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 DNM1P30-201ENST00000563586 452 ntBASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PRUNE2Q8WUY3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 AC098935.1-201ENST00000446057 611 ntBASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRUNE2Q8WUY3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms