Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 AL450472.2-201ENST00000603663 1156 ntBASIC16.74■□□□□ 0.27
SCML4Q8N228 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 Z97205.2-201ENST00000564697 1639 ntBASIC16.74■□□□□ 0.27
SCML4Q8N228 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SCML4Q8N228 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.74■□□□□ 0.27
SCML4Q8N228 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SCML4Q8N228 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.73■□□□□ 0.27
SCML4Q8N228 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.73■□□□□ 0.27
SCML4Q8N228 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.73■□□□□ 0.27
SCML4Q8N228 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.73■□□□□ 0.27
SCML4Q8N228 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 MRPS18AP1-201ENST00000414458 589 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 AC136604.1-201ENST00000418535 575 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 BCRP1-201ENST00000444246 691 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 AL512638.1-201ENST00000457493 794 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.73■□□□□ 0.27
SCML4Q8N228 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SCML4Q8N228 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.73■□□□□ 0.27
SCML4Q8N228 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.73■□□□□ 0.27
SCML4Q8N228 AC025048.3-201ENST00000590609 569 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 AC011467.4-201ENST00000594891 528 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 AC005702.4-201ENST00000618393 416 ntBASIC16.73■□□□□ 0.27
SCML4Q8N228 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.73■□□□□ 0.27
SCML4Q8N228 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SCML4Q8N228 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.73■□□□□ 0.27
SCML4Q8N228 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCML4Q8N228 AL391005.1-201ENST00000623953 2435 ntBASIC16.72■□□□□ 0.27
SCML4Q8N228 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.72■□□□□ 0.27
SCML4Q8N228 AC114501.2-201ENST00000439631 535 ntBASIC16.72■□□□□ 0.27
SCML4Q8N228 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.72■□□□□ 0.27
SCML4Q8N228 INGX-202ENST00000489074 768 ntBASIC16.72■□□□□ 0.27
SCML4Q8N228 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.72■□□□□ 0.27
SCML4Q8N228 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.72■□□□□ 0.27
SCML4Q8N228 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.72■□□□□ 0.27
SCML4Q8N228 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SCML4Q8N228 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SCML4Q8N228 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCML4Q8N228 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SCML4Q8N228 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
SCML4Q8N228 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms