Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL139010.1-201ENST00000454878 894 ntBASIC16.55■□□□□ 0.24
SIX5Q8N196 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.55■□□□□ 0.24
SIX5Q8N196 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.55■□□□□ 0.24
SIX5Q8N196 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.55■□□□□ 0.24
SIX5Q8N196 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.55■□□□□ 0.24
SIX5Q8N196 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.55■□□□□ 0.24
SIX5Q8N196 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SIX5Q8N196 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.55■□□□□ 0.24
SIX5Q8N196 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SIX5Q8N196 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SIX5Q8N196 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
SIX5Q8N196 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SIX5Q8N196 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX5Q8N196 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 FAM21FP-201ENST00000426241 1131 ntBASIC16.54■□□□□ 0.24
SIX5Q8N196 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.54■□□□□ 0.24
SIX5Q8N196 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX5Q8N196 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.54■□□□□ 0.24
SIX5Q8N196 AC068880.1-201ENST00000507289 2297 ntBASIC16.54■□□□□ 0.24
SIX5Q8N196 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.54■□□□□ 0.24
SIX5Q8N196 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SIX5Q8N196 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
SIX5Q8N196 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SIX5Q8N196 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SIX5Q8N196 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.53■□□□□ 0.24
SIX5Q8N196 CSF2RBP1-201ENST00000447905 391 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 AC108725.1-201ENST00000495472 409 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.53■□□□□ 0.24
SIX5Q8N196 RNA5SP412-201ENST00000516234 123 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.53■□□□□ 0.24
SIX5Q8N196 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
SIX5Q8N196 AL022328.1-201ENST00000610050 478 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.53■□□□□ 0.24
SIX5Q8N196 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.53■□□□□ 0.24
SIX5Q8N196 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.53■□□□□ 0.24
SIX5Q8N196 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SIX5Q8N196 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms