Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NPAS3Q8IXF0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NPAS3Q8IXF0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.26
NPAS3Q8IXF0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.64■□□□□ 0.26
NPAS3Q8IXF0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.64■□□□□ 0.26
NPAS3Q8IXF0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AL691432.1-201ENST00000596308 1422 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AC105020.1-201ENST00000435356 2205 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AC004987.2-201ENST00000395959 1148 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 BOLA2P3-201ENST00000404566 256 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AZGP1P1-201ENST00000411909 902 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 EEF1DP4-201ENST00000446006 880 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 USP32P1-208ENST00000506594 1164 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 AC036164.1-201ENST00000570544 333 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 BTNL10-201ENST00000595971 695 ntBASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.64■□□□□ 0.25
NPAS3Q8IXF0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 RPL13P2-201ENST00000440687 659 ntBASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NPAS3Q8IXF0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NPAS3Q8IXF0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms