Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 SOCS2P1-201ENST00000417727 557 ntBASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 SLED1-202ENST00000512051 380 ntBASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 AC124283.3-201ENST00000570869 594 ntBASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 AP001282.1-201ENST00000531301 1499 ntBASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NPAS4Q8IUM7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 REXO1L8P-201ENST00000604378 1897 ntBASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC005229.1-201ENST00000392885 409 ntBASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 PTP4A1P2-201ENST00000546033 454 ntBASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 AC093525.8-201ENST00000624099 1342 ntBASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPAS4Q8IUM7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAS4Q8IUM7 KRT18P64-201ENST00000434946 1219 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms