Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.17■□□□□ 0.18
LDB1Q86U70 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.17■□□□□ 0.18
LDB1Q86U70 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.17■□□□□ 0.18
LDB1Q86U70 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 AC073389.1-201ENST00000595595 795 ntBASIC16.17■□□□□ 0.18
LDB1Q86U70 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.17■□□□□ 0.18
LDB1Q86U70 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LDB1Q86U70 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LDB1Q86U70 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.17■□□□□ 0.18
LDB1Q86U70 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
LDB1Q86U70 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 AC008677.1-201ENST00000519230 1561 ntBASIC16.17■□□□□ 0.18
LDB1Q86U70 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LDB1Q86U70 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LDB1Q86U70 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
LDB1Q86U70 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.16■□□□□ 0.18
LDB1Q86U70 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.16■□□□□ 0.18
LDB1Q86U70 CEND1P1-201ENST00000451006 455 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 AC105233.2-201ENST00000523697 349 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 FAM86C2P-203ENST00000528684 1004 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 AF228730.5-201ENST00000530288 346 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.16■□□□□ 0.18
LDB1Q86U70 AC010327.4-202ENST00000591484 748 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 SPTSSB-204ENST00000617024 1292 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 AC008267.7-201ENST00000624570 1194 ntBASIC16.16■□□□□ 0.18
LDB1Q86U70 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
LDB1Q86U70 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.16■□□□□ 0.18
LDB1Q86U70 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LDB1Q86U70 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
LDB1Q86U70 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LDB1Q86U70 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 AP005117.1-202ENST00000581724 1908 ntBASIC16.15■□□□□ 0.18
LDB1Q86U70 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LDB1Q86U70 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LDB1Q86U70 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 AC142381.1-201ENST00000426099 345 ntBASIC16.15■□□□□ 0.18
LDB1Q86U70 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LDB1Q86U70 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.15■□□□□ 0.18
LDB1Q86U70 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.15■□□□□ 0.18
LDB1Q86U70 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LDB1Q86U70 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms