Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC087499.5-201ENST00000452760 1342 ntBASIC20.66■□□□□ 0.9
TWISTNBQ3B726 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 AC010491.1-201ENST00000563101 2797 ntBASIC20.66■□□□□ 0.9
TWISTNBQ3B726 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TWISTNBQ3B726 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 PCDHA1-201ENST00000378133 2726 ntBASIC20.65■□□□□ 0.9
TWISTNBQ3B726 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.65■□□□□ 0.9
TWISTNBQ3B726 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TWISTNBQ3B726 AC112504.1-201ENST00000623415 1841 ntBASIC20.64■□□□□ 0.9
TWISTNBQ3B726 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TWISTNBQ3B726 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TWISTNBQ3B726 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 AZGP1P1-201ENST00000411909 902 ntBASIC20.64■□□□□ 0.89
TWISTNBQ3B726 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 SPCS2P1-201ENST00000561636 679 ntBASIC20.64■□□□□ 0.89
TWISTNBQ3B726 AC010336.2-201ENST00000564226 506 ntBASIC20.64■□□□□ 0.89
TWISTNBQ3B726 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 AL033527.5-202ENST00000641632 1098 ntBASIC20.64■□□□□ 0.89
TWISTNBQ3B726 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.64■□□□□ 0.89
TWISTNBQ3B726 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 REXO1L1P-202ENST00000608646 1974 ntBASIC20.63■□□□□ 0.89
TWISTNBQ3B726 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TWISTNBQ3B726 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms