Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC96Q2M329 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC96Q2M329 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 MRPS18AP1-201ENST00000414458 589 ntBASIC18.83■□□□□ 0.6
CCDC96Q2M329 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.83■□□□□ 0.6
CCDC96Q2M329 AL592424.1-201ENST00000563624 1536 ntBASIC18.83■□□□□ 0.6
CCDC96Q2M329 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CCDC96Q2M329 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC96Q2M329 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 AC087499.5-201ENST00000452760 1342 ntBASIC18.82■□□□□ 0.6
CCDC96Q2M329 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 TERF1P3-201ENST00000505638 1227 ntBASIC18.82■□□□□ 0.6
CCDC96Q2M329 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 LINC02560-201ENST00000596379 459 ntBASIC18.82■□□□□ 0.6
CCDC96Q2M329 AL844908.2-201ENST00000609461 460 ntBASIC18.82■□□□□ 0.6
CCDC96Q2M329 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 PCDHB19P-201ENST00000570871 2371 ntBASIC18.82■□□□□ 0.6
CCDC96Q2M329 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC96Q2M329 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC96Q2M329 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 AL035633.1-201ENST00000406139 838 ntBASIC18.81■□□□□ 0.6
CCDC96Q2M329 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 RN7SL618P-201ENST00000477850 296 ntBASIC18.81■□□□□ 0.6
CCDC96Q2M329 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC96Q2M329 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC96Q2M329 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms