Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 AC136604.1-201ENST00000418535 575 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 FAM197Y7-201ENST00000432892 766 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 AL591846.1-201ENST00000451736 433 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 AC026410.3-201ENST00000514280 936 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 AC078819.1-201ENST00000547454 765 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 AC012085.1-201ENST00000548270 765 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.81■□□□□ 0.76
DDR1Q08345 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.81■□□□□ 0.76
DDR1Q08345 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DDR1Q08345 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.81■□□□□ 0.76
DDR1Q08345 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DDR1Q08345 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
DDR1Q08345 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DDR1Q08345 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.81■□□□□ 0.76
DDR1Q08345 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.81■□□□□ 0.76
DDR1Q08345 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDR1Q08345 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.8■□□□□ 0.76
DDR1Q08345 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.8■□□□□ 0.76
DDR1Q08345 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.8■□□□□ 0.76
DDR1Q08345 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.8■□□□□ 0.76
DDR1Q08345 Z93015.1-201ENST00000451718 390 ntBASIC19.8■□□□□ 0.76
DDR1Q08345 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC19.8■□□□□ 0.76
DDR1Q08345 AHRR-211ENST00000515206 462 ntTSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 AC023310.1-201ENST00000554836 735 ntBASIC19.8■□□□□ 0.76
DDR1Q08345 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.8■□□□□ 0.76
DDR1Q08345 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDR1Q08345 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 AC139713.2-201ENST00000641328 2723 ntBASIC19.8■□□□□ 0.76
DDR1Q08345 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDR1Q08345 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDR1Q08345 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.79■□□□□ 0.76
DDR1Q08345 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.79■□□□□ 0.76
DDR1Q08345 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
DDR1Q08345 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
DDR1Q08345 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 ACKR1-201ENST00000368121 1240 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.79■□□□□ 0.76
DDR1Q08345 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.79■□□□□ 0.76
DDR1Q08345 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC19.79■□□□□ 0.76
DDR1Q08345 MIR4741-201ENST00000579822 90 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.79■□□□□ 0.76
DDR1Q08345 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 AL121723.1-201ENST00000445194 1519 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 AC005915.1-201ENST00000624912 2018 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 HLA-A-202ENST00000376806 1854 ntBASIC19.79■□□□□ 0.76
DDR1Q08345 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDR1Q08345 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.79■□□□□ 0.76
DDR1Q08345 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms