Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
COL10A1Q03692 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.71□□□□□ -0.21
COL10A1Q03692 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
COL10A1Q03692 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC13.71□□□□□ -0.21
COL10A1Q03692 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.71□□□□□ -0.21
COL10A1Q03692 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.71□□□□□ -0.21
COL10A1Q03692 PRYP6-201ENST00000514804 343 ntBASIC13.71□□□□□ -0.21
COL10A1Q03692 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.71□□□□□ -0.21
COL10A1Q03692 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.71□□□□□ -0.21
COL10A1Q03692 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
COL10A1Q03692 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.71□□□□□ -0.21
COL10A1Q03692 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.71□□□□□ -0.21
COL10A1Q03692 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.71□□□□□ -0.21
COL10A1Q03692 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.71□□□□□ -0.21
COL10A1Q03692 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
COL10A1Q03692 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL10A1Q03692 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL10A1Q03692 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.71□□□□□ -0.22
COL10A1Q03692 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
COL10A1Q03692 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
COL10A1Q03692 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
COL10A1Q03692 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.7□□□□□ -0.22
COL10A1Q03692 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 MCCD1P2-201ENST00000423228 335 ntBASIC13.7□□□□□ -0.22
COL10A1Q03692 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AL671277.1-201ENST00000429656 993 ntBASIC13.7□□□□□ -0.22
COL10A1Q03692 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 AC092183.1-201ENST00000469884 875 ntBASIC13.7□□□□□ -0.22
COL10A1Q03692 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.7□□□□□ -0.22
COL10A1Q03692 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.7□□□□□ -0.22
COL10A1Q03692 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AL671883.3-201ENST00000603274 991 ntBASIC13.7□□□□□ -0.22
COL10A1Q03692 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
COL10A1Q03692 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
COL10A1Q03692 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
COL10A1Q03692 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.7□□□□□ -0.22
COL10A1Q03692 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 DBET-201ENST00000630918 3363 ntBASIC13.69□□□□□ -0.22
COL10A1Q03692 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.69□□□□□ -0.22
COL10A1Q03692 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 AC024909.3-201ENST00000611513 2257 ntBASIC13.69□□□□□ -0.22
COL10A1Q03692 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
COL10A1Q03692 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL10A1Q03692 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms