Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.74■□□□□ 0.75
SCN7AQ01118 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.74■□□□□ 0.75
SCN7AQ01118 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SCN7AQ01118 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCN7AQ01118 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN7AQ01118 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCN7AQ01118 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SCN7AQ01118 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN7AQ01118 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN7AQ01118 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SCN7AQ01118 MIR648-201ENST00000385046 94 ntBASIC19.73■□□□□ 0.75
SCN7AQ01118 IGHJ2P-201ENST00000454480 60 ntBASIC19.73■□□□□ 0.75
SCN7AQ01118 AC091804.1-201ENST00000486888 567 ntBASIC19.73■□□□□ 0.75
SCN7AQ01118 AC103810.3-201ENST00000583567 96 ntBASIC19.73■□□□□ 0.75
SCN7AQ01118 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN7AQ01118 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SCN7AQ01118 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCN7AQ01118 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN7AQ01118 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCN7AQ01118 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SCN7AQ01118 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN7AQ01118 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 TK1-203ENST00000588734 1681 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN7AQ01118 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN7AQ01118 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN7AQ01118 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SCN7AQ01118 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN7AQ01118 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SCN7AQ01118 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SCN7AQ01118 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN7AQ01118 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 FAM197Y7-201ENST00000432892 766 ntBASIC19.71■□□□□ 0.75
SCN7AQ01118 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 Z93015.1-201ENST00000451718 390 ntBASIC19.71■□□□□ 0.75
SCN7AQ01118 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN7AQ01118 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AL008638.5-201ENST00000623814 1298 ntBASIC19.71■□□□□ 0.75
SCN7AQ01118 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN7AQ01118 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN7AQ01118 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN7AQ01118 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN7AQ01118 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCN7AQ01118 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN7AQ01118 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN7AQ01118 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SCN7AQ01118 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.7■□□□□ 0.74
SCN7AQ01118 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN7AQ01118 CALR4P-201ENST00000431943 946 ntBASIC19.7■□□□□ 0.74
SCN7AQ01118 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.7■□□□□ 0.74
SCN7AQ01118 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC19.7■□□□□ 0.74
SCN7AQ01118 AL118558.3-201ENST00000607414 1079 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms